Harvard shot 29 of 39 from the foul line to Fordham's 8 of 14, with the Rams committing 29 fouls to Harvard's 14.
Fordham jumped out to a 21-10 lead midway through the first half, with Frazier leading the way with five points, but Harvard made a 19-3 run with Travis scoring 12 points.
The Crimson led 36-33 at the break.
The Rams closed to one point, 36-35, on Canty's dunk 34 seconds in to the second half but never got closer.
NCAA title game hero Kris Jenkins said he will withdraw his name from the NBA draft and return to Villanova for his senior season.
Andy Katz breaks down the likelihood of Villanova, Syracuse, North Carolina or Oklahoma making a run to the Final Four next season.
Florida State has announced that Xavier Rathan-Mayes will return to the court for his junior season. The 6-foot-4 guard declared for the NBA draft last month but did not hire an agent.